Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a2Q9JLR1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sec61a2Q9JLR1 Grk6-206ENSMUST00000224995 2971 ntBASIC16.08■□□□□ 0.17
Sec61a2Q9JLR1 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.08■□□□□ 0.17
Sec61a2Q9JLR1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Sec61a2Q9JLR1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sec61a2Q9JLR1 Fst-202ENSMUST00000223640 2612 ntBASIC16.08■□□□□ 0.17
Sec61a2Q9JLR1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a2Q9JLR1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Gm6211-202ENSMUST00000167849 925 ntBASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a2Q9JLR1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Sec61a2Q9JLR1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a2Q9JLR1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.04■□□□□ 0.16
Sec61a2Q9JLR1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms