Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4bQ9ES00 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4bQ9ES00 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Dancr-204ENSMUST00000132389 2347 ntBASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4bQ9ES00 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4bQ9ES00 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ube4bQ9ES00 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ube4bQ9ES00 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Gm13241-201ENSMUST00000094493 780 ntBASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4bQ9ES00 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms