Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4aQ9D7V1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Gm13146-201ENSMUST00000118508 780 ntBASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4aQ9D7V1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Sh2d4aQ9D7V1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d4aQ9D7V1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d4aQ9D7V1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d4aQ9D7V1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Sh2d4aQ9D7V1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sh2d4aQ9D7V1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Sh2d4aQ9D7V1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4aQ9D7V1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.33■□□□□ 0.36
Sh2d4aQ9D7V1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4aQ9D7V1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4aQ9D7V1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4aQ9D7V1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sh2d4aQ9D7V1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4aQ9D7V1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4aQ9D7V1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sh2d4aQ9D7V1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4aQ9D7V1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4aQ9D7V1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4aQ9D7V1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4aQ9D7V1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4aQ9D7V1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d4aQ9D7V1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4aQ9D7V1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d4aQ9D7V1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4aQ9D7V1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4aQ9D7V1 Gm13534-201ENSMUST00000121169 513 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms