Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb4aQ9D6F9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Idnk-204ENSMUST00000226010 1898 ntBASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tubb4aQ9D6F9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tubb4aQ9D6F9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tubb4aQ9D6F9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Golgb1-201ENSMUST00000023534 498 ntBASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.28■□□□□ 0.68
Tubb4aQ9D6F9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb4aQ9D6F9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb4aQ9D6F9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb4aQ9D6F9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Tubb4aQ9D6F9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb4aQ9D6F9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb4aQ9D6F9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb4aQ9D6F9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb4aQ9D6F9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb4aQ9D6F9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb4aQ9D6F9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubb4aQ9D6F9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tubb4aQ9D6F9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Tubb4aQ9D6F9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubb4aQ9D6F9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb4aQ9D6F9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.25■□□□□ 0.67
Tubb4aQ9D6F9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb4aQ9D6F9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb4aQ9D6F9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.25■□□□□ 0.67
Tubb4aQ9D6F9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.25■□□□□ 0.67
Tubb4aQ9D6F9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb4aQ9D6F9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb4aQ9D6F9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb4aQ9D6F9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb4aQ9D6F9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubb4aQ9D6F9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms