Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cfap53Q9D439 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap53Q9D439 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.61■□□□□ 0.73
Cfap53Q9D439 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap53Q9D439 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap53Q9D439 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap53Q9D439 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Grk6-206ENSMUST00000224995 2971 ntBASIC19.6■□□□□ 0.73
Cfap53Q9D439 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cfap53Q9D439 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.6■□□□□ 0.73
Cfap53Q9D439 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap53Q9D439 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap53Q9D439 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cfap53Q9D439 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.59■□□□□ 0.73
Cfap53Q9D439 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap53Q9D439 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.59■□□□□ 0.73
Cfap53Q9D439 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap53Q9D439 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cfap53Q9D439 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap53Q9D439 Fst-202ENSMUST00000223640 2612 ntBASIC19.59■□□□□ 0.73
Cfap53Q9D439 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap53Q9D439 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.59■□□□□ 0.73
Cfap53Q9D439 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cfap53Q9D439 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap53Q9D439 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap53Q9D439 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap53Q9D439 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cfap53Q9D439 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.58■□□□□ 0.73
Cfap53Q9D439 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cfap53Q9D439 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cfap53Q9D439 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Cfap53Q9D439 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cfap53Q9D439 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Cfap53Q9D439 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.58■□□□□ 0.72
Cfap53Q9D439 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap53Q9D439 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap53Q9D439 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap53Q9D439 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap53Q9D439 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap53Q9D439 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap53Q9D439 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.57■□□□□ 0.72
Cfap53Q9D439 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap53Q9D439 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap53Q9D439 Flg-201ENSMUST00000050758 1488 ntBASIC19.55■□□□□ 0.72
Cfap53Q9D439 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap53Q9D439 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap53Q9D439 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cfap53Q9D439 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.55■□□□□ 0.72
Cfap53Q9D439 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.55■□□□□ 0.72
Cfap53Q9D439 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap53Q9D439 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.55■□□□□ 0.72
Cfap53Q9D439 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap53Q9D439 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap53Q9D439 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.55■□□□□ 0.72
Cfap53Q9D439 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap53Q9D439 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap53Q9D439 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms