Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk1aQ9D132 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk1aQ9D132 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk1aQ9D132 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Upk1aQ9D132 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk1aQ9D132 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Upk1aQ9D132 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk1aQ9D132 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.98■□□□□ 0.31
Upk1aQ9D132 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk1aQ9D132 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk1aQ9D132 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk1aQ9D132 Haglr-201ENSMUST00000100000 2085 ntBASIC16.97■□□□□ 0.31
Upk1aQ9D132 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Upk1aQ9D132 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk1aQ9D132 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk1aQ9D132 Gm13534-201ENSMUST00000121169 513 ntBASIC16.97■□□□□ 0.31
Upk1aQ9D132 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Upk1aQ9D132 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.97■□□□□ 0.31
Upk1aQ9D132 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Upk1aQ9D132 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.97■□□□□ 0.31
Upk1aQ9D132 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk1aQ9D132 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk1aQ9D132 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk1aQ9D132 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk1aQ9D132 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.96■□□□□ 0.3
Upk1aQ9D132 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.96■□□□□ 0.3
Upk1aQ9D132 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Upk1aQ9D132 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.96■□□□□ 0.3
Upk1aQ9D132 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Reep4-203ENSMUST00000226563 1444 ntBASIC16.95■□□□□ 0.3
Upk1aQ9D132 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Upk1aQ9D132 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Gm22325-201ENSMUST00000158904 308 ntBASIC16.94■□□□□ 0.3
Upk1aQ9D132 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Gm9988-201ENSMUST00000069786 435 ntBASIC16.94■□□□□ 0.3
Upk1aQ9D132 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upk1aQ9D132 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Upk1aQ9D132 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upk1aQ9D132 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.93■□□□□ 0.3
Upk1aQ9D132 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk1aQ9D132 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.93■□□□□ 0.3
Upk1aQ9D132 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk1aQ9D132 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk1aQ9D132 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk1aQ9D132 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Upk1aQ9D132 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk1aQ9D132 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk1aQ9D132 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk1aQ9D132 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk1aQ9D132 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms