Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Tmem88Q9D0N8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tmem88Q9D0N8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Tmem88Q9D0N8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Rps24-207ENSMUST00000224568 714 ntBASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem88Q9D0N8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Tmem88Q9D0N8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Gm9959-201ENSMUST00000068277 390 ntBASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem88Q9D0N8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tmem88Q9D0N8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.11□□□□□ -0.15
Tmem88Q9D0N8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem88Q9D0N8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.11□□□□□ -0.15
Tmem88Q9D0N8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem88Q9D0N8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem88Q9D0N8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms