Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd1Q9D0E3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd1Q9D0E3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd1Q9D0E3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd1Q9D0E3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.22■□□□□ 0.67
Lysmd1Q9D0E3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd1Q9D0E3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lysmd1Q9D0E3 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Gm24841-201ENSMUST00000158676 357 ntBASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd1Q9D0E3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Gm6296-201ENSMUST00000222599 943 ntBASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd1Q9D0E3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.19■□□□□ 0.66
Lysmd1Q9D0E3 Gm12644-201ENSMUST00000119935 606 ntBASIC19.19■□□□□ 0.66
Lysmd1Q9D0E3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd1Q9D0E3 Gm26308-201ENSMUST00000157768 69 ntBASIC19.19■□□□□ 0.66
Lysmd1Q9D0E3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.19■□□□□ 0.66
Lysmd1Q9D0E3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd1Q9D0E3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.19■□□□□ 0.66
Lysmd1Q9D0E3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd1Q9D0E3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd1Q9D0E3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 Gm12260-201ENSMUST00000122447 411 ntBASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd1Q9D0E3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Lysmd1Q9D0E3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd1Q9D0E3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd1Q9D0E3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd1Q9D0E3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.17■□□□□ 0.66
Lysmd1Q9D0E3 Gm13401-201ENSMUST00000117074 291 ntBASIC19.17■□□□□ 0.66
Lysmd1Q9D0E3 Gm4995-201ENSMUST00000117247 432 ntBASIC19.17■□□□□ 0.66
Lysmd1Q9D0E3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd1Q9D0E3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd1Q9D0E3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Lysmd1Q9D0E3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd1Q9D0E3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Gm15372-201ENSMUST00000120729 834 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms