Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf135Q9CWS1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf135Q9CWS1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf135Q9CWS1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf135Q9CWS1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf135Q9CWS1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf135Q9CWS1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.58■□□□□ 0.56
Rnf135Q9CWS1 Gm20760-201ENSMUST00000179197 648 ntBASIC18.58■□□□□ 0.56
Rnf135Q9CWS1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rnf135Q9CWS1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.58■□□□□ 0.56
Rnf135Q9CWS1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.58■□□□□ 0.56
Rnf135Q9CWS1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf135Q9CWS1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf135Q9CWS1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf135Q9CWS1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Rnf135Q9CWS1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.58■□□□□ 0.56
Rnf135Q9CWS1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf135Q9CWS1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf135Q9CWS1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Gm22240-201ENSMUST00000175225 82 ntBASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf135Q9CWS1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Gm7290-201ENSMUST00000104990 617 ntBASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Gm12918-201ENSMUST00000120234 636 ntBASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Gm15710-201ENSMUST00000121821 636 ntBASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Gm5075-201ENSMUST00000196916 622 ntBASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Gm5408-201ENSMUST00000197998 747 ntBASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf135Q9CWS1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf135Q9CWS1 Gm6365-201ENSMUST00000054711 744 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms