Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Golph3-205ENSMUST00000228671 2842 ntBASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Msantd3Q9CR78 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msantd3Q9CR78 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Gm11539-201ENSMUST00000119837 557 ntBASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Gm13436-201ENSMUST00000120418 567 ntBASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.13■□□□□ 0.33
Msantd3Q9CR78 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msantd3Q9CR78 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msantd3Q9CR78 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Grk6-206ENSMUST00000224995 2971 ntBASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms