Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.96■□□□□ 0.47
Retreg3Q9CQV4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retreg3Q9CQV4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg3Q9CQV4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg3Q9CQV4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Retreg3Q9CQV4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Mir2861-201ENSMUST00000175539 82 ntBASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Mir6982-201ENSMUST00000184354 68 ntBASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Retreg3Q9CQV4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Gm7977-201ENSMUST00000193787 748 ntBASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Retreg3Q9CQV4 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms