Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm15375-201ENSMUST00000119510 849 ntBASIC18.37■□□□□ 0.53
Gtf2ird2Q99NI3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.37■□□□□ 0.53
Gtf2ird2Q99NI3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.37■□□□□ 0.53
Gtf2ird2Q99NI3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.37■□□□□ 0.53
Gtf2ird2Q99NI3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf2ird2Q99NI3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf2ird2Q99NI3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gtf2ird2Q99NI3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf2ird2Q99NI3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf2ird2Q99NI3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf2ird2Q99NI3 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.36■□□□□ 0.53
Gtf2ird2Q99NI3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf2ird2Q99NI3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf2ird2Q99NI3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gtf2ird2Q99NI3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf2ird2Q99NI3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf2ird2Q99NI3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Mir6349-201ENSMUST00000184059 97 ntBASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf2ird2Q99NI3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf2ird2Q99NI3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gtf2ird2Q99NI3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Gtf2ird2Q99NI3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf2ird2Q99NI3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf2ird2Q99NI3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2ird2Q99NI3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2ird2Q99NI3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2ird2Q99NI3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2ird2Q99NI3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gtf2ird2Q99NI3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2ird2Q99NI3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms