Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpgs1Q99MS8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpgs1Q99MS8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpgs1Q99MS8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpgs1Q99MS8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Gm43183-201ENSMUST00000200632 547 ntBASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Grk6-206ENSMUST00000224995 2971 ntBASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpgs1Q99MS8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpgs1Q99MS8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Gm6576-201ENSMUST00000169678 883 ntBASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpgs1Q99MS8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tpgs1Q99MS8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.58■□□□□ 0.57
Tpgs1Q99MS8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tpgs1Q99MS8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.58■□□□□ 0.57
Tpgs1Q99MS8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tpgs1Q99MS8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tpgs1Q99MS8 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.58■□□□□ 0.57
Tpgs1Q99MS8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tpgs1Q99MS8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.58■□□□□ 0.56
Tpgs1Q99MS8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.58■□□□□ 0.56
Tpgs1Q99MS8 Gm13401-201ENSMUST00000117074 291 ntBASIC18.58■□□□□ 0.56
Tpgs1Q99MS8 Gm12382-201ENSMUST00000122005 922 ntBASIC18.58■□□□□ 0.56
Tpgs1Q99MS8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tpgs1Q99MS8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tpgs1Q99MS8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tpgs1Q99MS8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tpgs1Q99MS8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tpgs1Q99MS8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tpgs1Q99MS8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms