Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Gm38285-201ENSMUST00000192928 922 ntBASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Birc2-201ENSMUST00000054878 378 ntBASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Gm8587-201ENSMUST00000076538 843 ntBASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col25a1Q99MQ5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col25a1Q99MQ5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
Col25a1Q99MQ5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col25a1Q99MQ5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Col25a1Q99MQ5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Gm10576-201ENSMUST00000191927 825 ntBASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col25a1Q99MQ5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Gm7791-201ENSMUST00000219066 539 ntBASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col25a1Q99MQ5 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 Gm11594-201ENSMUST00000122313 162 ntBASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 AA386476-201ENSMUST00000098781 1665 ntBASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Col25a1Q99MQ5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col25a1Q99MQ5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col25a1Q99MQ5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Col25a1Q99MQ5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
Col25a1Q99MQ5 Gm43438-201ENSMUST00000198133 379 ntBASIC18.48■□□□□ 0.55
Col25a1Q99MQ5 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.48■□□□□ 0.55
Col25a1Q99MQ5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Gm6623-201ENSMUST00000173570 544 ntBASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Gm2213-201ENSMUST00000197485 688 ntBASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col25a1Q99MQ5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms