Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx6-1Q99MA9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx6-1Q99MA9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nkx6-1Q99MA9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx6-1Q99MA9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx6-1Q99MA9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx6-1Q99MA9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx6-1Q99MA9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.71■□□□□ 0.27
Nkx6-1Q99MA9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx6-1Q99MA9 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.71■□□□□ 0.27
Nkx6-1Q99MA9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx6-1Q99MA9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx6-1Q99MA9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx6-1Q99MA9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.71■□□□□ 0.27
Nkx6-1Q99MA9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nkx6-1Q99MA9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
Nkx6-1Q99MA9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Gm16061-201ENSMUST00000122167 857 ntBASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx6-1Q99MA9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 Gm28033-201ENSMUST00000184224 96 ntBASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx6-1Q99MA9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Gm17807-201ENSMUST00000186869 298 ntBASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms