Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clp1Q99LI9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.91■□□□□ 0.62
Clp1Q99LI9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.9■□□□□ 0.62
Clp1Q99LI9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Gm7638-201ENSMUST00000121348 967 ntBASIC18.9■□□□□ 0.62
Clp1Q99LI9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Gm7791-201ENSMUST00000219066 539 ntBASIC18.9■□□□□ 0.62
Clp1Q99LI9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.9■□□□□ 0.62
Clp1Q99LI9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clp1Q99LI9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clp1Q99LI9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.89■□□□□ 0.61
Clp1Q99LI9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Clp1Q99LI9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clp1Q99LI9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Clp1Q99LI9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clp1Q99LI9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Clp1Q99LI9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clp1Q99LI9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clp1Q99LI9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clp1Q99LI9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clp1Q99LI9 Gm24841-201ENSMUST00000158676 357 ntBASIC18.88■□□□□ 0.61
Clp1Q99LI9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.88■□□□□ 0.61
Clp1Q99LI9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Clp1Q99LI9 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.88■□□□□ 0.61
Clp1Q99LI9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.88■□□□□ 0.61
Clp1Q99LI9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clp1Q99LI9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clp1Q99LI9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Clp1Q99LI9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clp1Q99LI9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clp1Q99LI9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.87■□□□□ 0.61
Clp1Q99LI9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clp1Q99LI9 Gm7370-201ENSMUST00000219471 767 ntBASIC18.87■□□□□ 0.61
Clp1Q99LI9 Gm21559-201ENSMUST00000220638 855 ntBASIC18.87■□□□□ 0.61
Clp1Q99LI9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clp1Q99LI9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clp1Q99LI9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clp1Q99LI9 Gm8587-201ENSMUST00000076538 843 ntBASIC18.87■□□□□ 0.61
Clp1Q99LI9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Clp1Q99LI9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clp1Q99LI9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clp1Q99LI9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Clp1Q99LI9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.86■□□□□ 0.61
Clp1Q99LI9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Clp1Q99LI9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Gm5587-201ENSMUST00000206270 674 ntBASIC18.86■□□□□ 0.61
Clp1Q99LI9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clp1Q99LI9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Gm10418-201ENSMUST00000100943 576 ntBASIC18.85■□□□□ 0.61
Clp1Q99LI9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Mir1668-201ENSMUST00000184114 107 ntBASIC18.85■□□□□ 0.61
Clp1Q99LI9 Gm17971-201ENSMUST00000190239 806 ntBASIC18.85■□□□□ 0.61
Clp1Q99LI9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clp1Q99LI9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clp1Q99LI9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clp1Q99LI9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clp1Q99LI9 Gm9013-201ENSMUST00000132939 882 ntBASIC18.84■□□□□ 0.61
Clp1Q99LI9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms