Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40bQ8VHP8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Gm21956-201ENSMUST00000179946 522 ntBASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Rab40bQ8VHP8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Rab40bQ8VHP8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.09■□□□□ 0.17
Rab40bQ8VHP8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab40bQ8VHP8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab40bQ8VHP8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.08■□□□□ 0.17
Rab40bQ8VHP8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Rab40bQ8VHP8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab40bQ8VHP8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rab40bQ8VHP8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab40bQ8VHP8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Gm13146-201ENSMUST00000118508 780 ntBASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Gm22325-201ENSMUST00000158904 308 ntBASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40bQ8VHP8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms