Protein–RNA interactions for Protein: Q8VE37

Rcc1, Regulator of chromosome condensation, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcc1Q8VE37 Gm18671-201ENSMUST00000214826 683 ntBASIC15.43■□□□□ 0.06
Rcc1Q8VE37 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rcc1Q8VE37 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.43■□□□□ 0.06
Rcc1Q8VE37 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rcc1Q8VE37 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rcc1Q8VE37 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rcc1Q8VE37 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rcc1Q8VE37 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rcc1Q8VE37 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.43■□□□□ 0.06
Rcc1Q8VE37 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rcc1Q8VE37 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rcc1Q8VE37 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.43■□□□□ 0.06
Rcc1Q8VE37 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.42■□□□□ 0.06
Rcc1Q8VE37 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Tgds-204ENSMUST00000228543 1594 ntBASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Gm5874-201ENSMUST00000096101 508 ntBASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rcc1Q8VE37 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rcc1Q8VE37 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rcc1Q8VE37 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rcc1Q8VE37 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rcc1Q8VE37 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rcc1Q8VE37 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rcc1Q8VE37 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rcc1Q8VE37 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rcc1Q8VE37 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rcc1Q8VE37 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rcc1Q8VE37 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rcc1Q8VE37 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rcc1Q8VE37 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rcc1Q8VE37 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms