Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rprd1aQ8VDS4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rprd1aQ8VDS4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Rprd1aQ8VDS4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rprd1aQ8VDS4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.36■□□□□ 0.53
Rprd1aQ8VDS4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rprd1aQ8VDS4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rprd1aQ8VDS4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rprd1aQ8VDS4 Gm10812-201ENSMUST00000099864 546 ntBASIC18.36■□□□□ 0.53
Rprd1aQ8VDS4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rprd1aQ8VDS4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rprd1aQ8VDS4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rprd1aQ8VDS4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rprd1aQ8VDS4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rprd1aQ8VDS4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rprd1aQ8VDS4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rprd1aQ8VDS4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rprd1aQ8VDS4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rprd1aQ8VDS4 Gm15375-201ENSMUST00000119510 849 ntBASIC18.33■□□□□ 0.52
Rprd1aQ8VDS4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rprd1aQ8VDS4 Gm15378-201ENSMUST00000121894 207 ntBASIC18.33■□□□□ 0.52
Rprd1aQ8VDS4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rprd1aQ8VDS4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rprd1aQ8VDS4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rprd1aQ8VDS4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Rprd1aQ8VDS4 Fst-202ENSMUST00000223640 2612 ntBASIC18.33■□□□□ 0.52
Rprd1aQ8VDS4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rprd1aQ8VDS4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rprd1aQ8VDS4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rprd1aQ8VDS4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rprd1aQ8VDS4 Gm10698-201ENSMUST00000182663 604 ntBASIC18.32■□□□□ 0.52
Rprd1aQ8VDS4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.32■□□□□ 0.52
Rprd1aQ8VDS4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rprd1aQ8VDS4 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.32■□□□□ 0.52
Rprd1aQ8VDS4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rprd1aQ8VDS4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rprd1aQ8VDS4 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.32■□□□□ 0.52
Rprd1aQ8VDS4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rprd1aQ8VDS4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Rprd1aQ8VDS4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rprd1aQ8VDS4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms