Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.45■□□□□ 0.38
Q8VDP2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Q8VDP2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.45■□□□□ 0.38
Q8VDP2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Q8VDP2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Q8VDP2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Q8VDP2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.44■□□□□ 0.38
Q8VDP2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q8VDP2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.44■□□□□ 0.38
Q8VDP2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.44■□□□□ 0.38
Q8VDP2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q8VDP2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q8VDP2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Q8VDP2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q8VDP2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q8VDP2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Q8VDP2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.43■□□□□ 0.38
Q8VDP2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q8VDP2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q8VDP2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Q8VDP2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q8VDP2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q8VDP2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q8VDP2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.43■□□□□ 0.38
Q8VDP2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Q8VDP2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q8VDP2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q8VDP2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q8VDP2 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.43■□□□□ 0.38
Q8VDP2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Q8VDP2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.43■□□□□ 0.38
Q8VDP2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Q8VDP2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.43■□□□□ 0.38
Q8VDP2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q8VDP2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q8VDP2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Q8VDP2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Q8VDP2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Q8VDP2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q8VDP2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q8VDP2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Q8VDP2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Q8VDP2 Gm7417-201ENSMUST00000192950 473 ntBASIC17.42■□□□□ 0.38
Q8VDP2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.42■□□□□ 0.38
Q8VDP2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.42■□□□□ 0.38
Q8VDP2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.42■□□□□ 0.38
Q8VDP2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Q8VDP2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Q8VDP2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Q8VDP2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Q8VDP2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q8VDP2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q8VDP2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q8VDP2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q8VDP2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q8VDP2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Q8VDP2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q8VDP2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q8VDP2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Q8VDP2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.41■□□□□ 0.38
Q8VDP2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.41■□□□□ 0.38
Q8VDP2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.41■□□□□ 0.38
Q8VDP2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q8VDP2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q8VDP2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q8VDP2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q8VDP2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Q8VDP2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Q8VDP2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q8VDP2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q8VDP2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q8VDP2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Q8VDP2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q8VDP2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Q8VDP2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q8VDP2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Q8VDP2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q8VDP2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q8VDP2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.4■□□□□ 0.38
Q8VDP2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.4■□□□□ 0.38
Q8VDP2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Q8VDP2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q8VDP2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q8VDP2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q8VDP2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Q8VDP2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q8VDP2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Q8VDP2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q8VDP2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms