Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lsm1Q8VC85 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm1Q8VC85 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Gm10849-201ENSMUST00000100397 618 ntBASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Gm6365-201ENSMUST00000054711 744 ntBASIC17.11■□□□□ 0.33
Lsm1Q8VC85 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm1Q8VC85 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm1Q8VC85 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lsm1Q8VC85 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm1Q8VC85 Gm26571-201ENSMUST00000181399 666 ntBASIC17.09■□□□□ 0.33
Lsm1Q8VC85 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.09■□□□□ 0.33
Lsm1Q8VC85 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm1Q8VC85 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.08■□□□□ 0.33
Lsm1Q8VC85 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm1Q8VC85 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm1Q8VC85 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm1Q8VC85 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Gm7291-201ENSMUST00000199147 382 ntBASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm1Q8VC85 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm1Q8VC85 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm1Q8VC85 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm1Q8VC85 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm1Q8VC85 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm1Q8VC85 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm1Q8VC85 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm1Q8VC85 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm1Q8VC85 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm1Q8VC85 Gm18284-201ENSMUST00000172604 624 ntBASIC17.07■□□□□ 0.32
Lsm1Q8VC85 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms