Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slf1Q8R3P9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Slf1Q8R3P9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slf1Q8R3P9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Slf1Q8R3P9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slf1Q8R3P9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slf1Q8R3P9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slf1Q8R3P9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Gm26833-201ENSMUST00000180899 440 ntBASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slf1Q8R3P9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slf1Q8R3P9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Gm40848-201ENSMUST00000221998 324 ntBASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slf1Q8R3P9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.03■□□□□ 0.48
Slf1Q8R3P9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Slf1Q8R3P9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slf1Q8R3P9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slf1Q8R3P9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slf1Q8R3P9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.02■□□□□ 0.48
Slf1Q8R3P9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.02■□□□□ 0.48
Slf1Q8R3P9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slf1Q8R3P9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Slf1Q8R3P9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.02■□□□□ 0.47
Slf1Q8R3P9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Slf1Q8R3P9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Slf1Q8R3P9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slf1Q8R3P9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Slf1Q8R3P9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slf1Q8R3P9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18■□□□□ 0.47
Slf1Q8R3P9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slf1Q8R3P9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slf1Q8R3P9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Slf1Q8R3P9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Slf1Q8R3P9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18■□□□□ 0.47
Slf1Q8R3P9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slf1Q8R3P9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms