Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nudcd3Q8R1N4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nudcd3Q8R1N4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nudcd3Q8R1N4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nudcd3Q8R1N4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.89■□□□□ 0.45
Nudcd3Q8R1N4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nudcd3Q8R1N4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nudcd3Q8R1N4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nudcd3Q8R1N4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nudcd3Q8R1N4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nudcd3Q8R1N4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nudcd3Q8R1N4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nudcd3Q8R1N4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Nudcd3Q8R1N4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nudcd3Q8R1N4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Gm6139-201ENSMUST00000079261 882 ntBASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nudcd3Q8R1N4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Gm12821-201ENSMUST00000120022 600 ntBASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nudcd3Q8R1N4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms