Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Rpp40Q8R1F9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpp40Q8R1F9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpp40Q8R1F9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpp40Q8R1F9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Gm12382-201ENSMUST00000122005 922 ntBASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp40Q8R1F9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp40Q8R1F9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp40Q8R1F9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
Rpp40Q8R1F9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp40Q8R1F9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.13■□□□□ 0.65
Rpp40Q8R1F9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp40Q8R1F9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp40Q8R1F9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp40Q8R1F9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp40Q8R1F9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp40Q8R1F9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp40Q8R1F9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Gm6576-201ENSMUST00000169678 883 ntBASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp40Q8R1F9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Gm11643-201ENSMUST00000119578 864 ntBASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp40Q8R1F9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms