Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnot6Q8K3P5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnot6Q8K3P5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cnot6Q8K3P5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.54■□□□□ 0.4
Cnot6Q8K3P5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.54■□□□□ 0.4
Cnot6Q8K3P5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cnot6Q8K3P5 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.54■□□□□ 0.4
Cnot6Q8K3P5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnot6Q8K3P5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Gm26571-201ENSMUST00000181399 666 ntBASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Gm18671-201ENSMUST00000214826 683 ntBASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cnot6Q8K3P5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.52■□□□□ 0.4
Cnot6Q8K3P5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Cnot6Q8K3P5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cnot6Q8K3P5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cnot6Q8K3P5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cnot6Q8K3P5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Gm10849-201ENSMUST00000100397 618 ntBASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cnot6Q8K3P5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 AV356131-201ENSMUST00000206201 750 ntBASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cnot6Q8K3P5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cnot6Q8K3P5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cnot6Q8K3P5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.49■□□□□ 0.39
Cnot6Q8K3P5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cnot6Q8K3P5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.49■□□□□ 0.39
Cnot6Q8K3P5 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.49■□□□□ 0.39
Cnot6Q8K3P5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cnot6Q8K3P5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cnot6Q8K3P5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cnot6Q8K3P5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Cnot6Q8K3P5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cnot6Q8K3P5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cnot6Q8K3P5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cnot6Q8K3P5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.48■□□□□ 0.39
Cnot6Q8K3P5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cnot6Q8K3P5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cnot6Q8K3P5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cnot6Q8K3P5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cnot6Q8K3P5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms