Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1lQ8K1X4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1lQ8K1X4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1lQ8K1X4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1lQ8K1X4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Nckap1lQ8K1X4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1lQ8K1X4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1lQ8K1X4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1lQ8K1X4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1lQ8K1X4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Gm27405-201ENSMUST00000184201 112 ntBASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1lQ8K1X4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1lQ8K1X4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 Gm6365-201ENSMUST00000054711 744 ntBASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1lQ8K1X4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nckap1lQ8K1X4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nckap1lQ8K1X4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nckap1lQ8K1X4 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.33■□□□□ 0.37
Nckap1lQ8K1X4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nckap1lQ8K1X4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nckap1lQ8K1X4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nckap1lQ8K1X4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nckap1lQ8K1X4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nckap1lQ8K1X4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.33■□□□□ 0.36
Nckap1lQ8K1X4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nckap1lQ8K1X4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms