Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnot3Q8K0V4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.82■□□□□ 0.28
Cnot3Q8K0V4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnot3Q8K0V4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cnot3Q8K0V4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cnot3Q8K0V4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnot3Q8K0V4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnot3Q8K0V4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnot3Q8K0V4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnot3Q8K0V4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnot3Q8K0V4 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Gm8493-201ENSMUST00000196881 489 ntBASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cnot3Q8K0V4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cnot3Q8K0V4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cnot3Q8K0V4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cnot3Q8K0V4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cnot3Q8K0V4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cnot3Q8K0V4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cnot3Q8K0V4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.77■□□□□ 0.28
Cnot3Q8K0V4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Cnot3Q8K0V4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cnot3Q8K0V4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.77■□□□□ 0.28
Cnot3Q8K0V4 Gm43173-201ENSMUST00000202246 593 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms