Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm16061-201ENSMUST00000122167 857 ntBASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm24841-201ENSMUST00000158676 357 ntBASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm7791-201ENSMUST00000219066 539 ntBASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rtn4rl1Q8K0S5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm9103-201ENSMUST00000119371 405 ntBASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rl1Q8K0S5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm25016-201ENSMUST00000158399 131 ntBASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Rtn4rl1Q8K0S5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm13401-201ENSMUST00000117074 291 ntBASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm17661-201ENSMUST00000170317 270 ntBASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rtn4rl1Q8K0S5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm14859-201ENSMUST00000117752 357 ntBASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Gm7370-201ENSMUST00000219471 767 ntBASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rtn4rl1Q8K0S5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rtn4rl1Q8K0S5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rtn4rl1Q8K0S5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn4rl1Q8K0S5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Rtn4rl1Q8K0S5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn4rl1Q8K0S5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn4rl1Q8K0S5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Rtn4rl1Q8K0S5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn4rl1Q8K0S5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn4rl1Q8K0S5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Rtn4rl1Q8K0S5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Rtn4rl1Q8K0S5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4rl1Q8K0S5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms