Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.51■□□□□ 0.39
Scamp1Q8K021 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Gm18025-201ENSMUST00000221733 862 ntBASIC17.51■□□□□ 0.39
Scamp1Q8K021 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.51■□□□□ 0.39
Scamp1Q8K021 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.5■□□□□ 0.39
Scamp1Q8K021 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.49■□□□□ 0.39
Scamp1Q8K021 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp1Q8K021 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp1Q8K021 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp1Q8K021 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.49■□□□□ 0.39
Scamp1Q8K021 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Scamp1Q8K021 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Scamp1Q8K021 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp1Q8K021 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp1Q8K021 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.49■□□□□ 0.39
Scamp1Q8K021 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.49■□□□□ 0.39
Scamp1Q8K021 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp1Q8K021 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scamp1Q8K021 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Fst-202ENSMUST00000223640 2612 ntBASIC17.48■□□□□ 0.39
Scamp1Q8K021 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scamp1Q8K021 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Gm37292-201ENSMUST00000192062 758 ntBASIC17.47■□□□□ 0.39
Scamp1Q8K021 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Gm5417-201ENSMUST00000079706 384 ntBASIC17.47■□□□□ 0.39
Scamp1Q8K021 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scamp1Q8K021 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scamp1Q8K021 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scamp1Q8K021 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scamp1Q8K021 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scamp1Q8K021 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.45■□□□□ 0.38
Scamp1Q8K021 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scamp1Q8K021 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scamp1Q8K021 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.45■□□□□ 0.38
Scamp1Q8K021 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scamp1Q8K021 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.45■□□□□ 0.38
Scamp1Q8K021 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Scamp1Q8K021 Mir5122-201ENSMUST00000175004 89 ntBASIC17.45■□□□□ 0.38
Scamp1Q8K021 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scamp1Q8K021 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms