Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1aQ8CIG0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Depdc1aQ8CIG0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Depdc1aQ8CIG0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.19■□□□□ 0.82
Depdc1aQ8CIG0 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.19■□□□□ 0.82
Depdc1aQ8CIG0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Depdc1aQ8CIG0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Depdc1aQ8CIG0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Depdc1aQ8CIG0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Gm10418-201ENSMUST00000100943 576 ntBASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Depdc1aQ8CIG0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Gm29791-202ENSMUST00000207888 369 ntBASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1aQ8CIG0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Gm43799-201ENSMUST00000201845 579 ntBASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.16■□□□□ 0.82
Depdc1aQ8CIG0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Gm30025-201ENSMUST00000218555 728 ntBASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1aQ8CIG0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Depdc1aQ8CIG0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Gm4974-201ENSMUST00000209974 875 ntBASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms