Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clip4Q8CI96 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clip4Q8CI96 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.98■□□□□ 0.47
Clip4Q8CI96 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clip4Q8CI96 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.97■□□□□ 0.47
Clip4Q8CI96 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clip4Q8CI96 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Clip4Q8CI96 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clip4Q8CI96 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clip4Q8CI96 Gm26524-201ENSMUST00000192339 390 ntBASIC17.96■□□□□ 0.47
Clip4Q8CI96 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.96■□□□□ 0.47
Clip4Q8CI96 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.96■□□□□ 0.47
Clip4Q8CI96 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clip4Q8CI96 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.96■□□□□ 0.47
Clip4Q8CI96 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clip4Q8CI96 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clip4Q8CI96 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clip4Q8CI96 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.94■□□□□ 0.46
Clip4Q8CI96 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.94■□□□□ 0.46
Clip4Q8CI96 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clip4Q8CI96 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms