Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rbm28Q8CGC6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rbm28Q8CGC6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rbm28Q8CGC6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rbm28Q8CGC6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rbm28Q8CGC6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rbm28Q8CGC6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rbm28Q8CGC6 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.1■□□□□ 0.97
Rbm28Q8CGC6 Gm15375-201ENSMUST00000119510 849 ntBASIC21.1■□□□□ 0.97
Rbm28Q8CGC6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.1■□□□□ 0.97
Rbm28Q8CGC6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rbm28Q8CGC6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.1■□□□□ 0.97
Rbm28Q8CGC6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Rbm28Q8CGC6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rbm28Q8CGC6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Rbm28Q8CGC6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rbm28Q8CGC6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rbm28Q8CGC6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rbm28Q8CGC6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rbm28Q8CGC6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Rbm28Q8CGC6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rbm28Q8CGC6 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.08■□□□□ 0.97
Rbm28Q8CGC6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rbm28Q8CGC6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rbm28Q8CGC6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Rbm28Q8CGC6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rbm28Q8CGC6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rbm28Q8CGC6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rbm28Q8CGC6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rbm28Q8CGC6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rbm28Q8CGC6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rbm28Q8CGC6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Rbm28Q8CGC6 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Gm15565-201ENSMUST00000118890 427 ntBASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Gm13836-201ENSMUST00000121159 501 ntBASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Mir5122-201ENSMUST00000175004 89 ntBASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Gm43183-201ENSMUST00000200632 547 ntBASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Gm18025-201ENSMUST00000221733 862 ntBASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rbm28Q8CGC6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms