Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Gm8493-201ENSMUST00000196881 489 ntBASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc28bQ8CEG5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc28bQ8CEG5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc28bQ8CEG5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc28bQ8CEG5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc28bQ8CEG5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc28bQ8CEG5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc28bQ8CEG5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.64■□□□□ 0.41
Ccdc28bQ8CEG5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc28bQ8CEG5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms