Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC22.18■■□□□ 1.14
Trim52Q8CDV4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim52Q8CDV4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim52Q8CDV4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim52Q8CDV4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim52Q8CDV4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC22.18■■□□□ 1.14
Trim52Q8CDV4 Gm6659-201ENSMUST00000174752 547 ntBASIC22.18■■□□□ 1.14
Trim52Q8CDV4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Trim52Q8CDV4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim52Q8CDV4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim52Q8CDV4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim52Q8CDV4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.18■■□□□ 1.14
Trim52Q8CDV4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim52Q8CDV4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Gm18032-201ENSMUST00000222541 538 ntBASIC22.17■■□□□ 1.14
Trim52Q8CDV4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim52Q8CDV4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim52Q8CDV4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Golph3-205ENSMUST00000228671 2842 ntBASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim52Q8CDV4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Trim52Q8CDV4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim52Q8CDV4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim52Q8CDV4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim52Q8CDV4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Trim52Q8CDV4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim52Q8CDV4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim52Q8CDV4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC22.13■■□□□ 1.13
Trim52Q8CDV4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Gm4217-201ENSMUST00000182243 1002 ntBASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim52Q8CDV4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Gm2274-201ENSMUST00000184539 609 ntBASIC22.12■■□□□ 1.13
Trim52Q8CDV4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim52Q8CDV4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms