Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.46■□□□□ 0.87
Rtp1Q8C8C1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtp1Q8C8C1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rtp1Q8C8C1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rtp1Q8C8C1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rtp1Q8C8C1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtp1Q8C8C1 Mir2861-201ENSMUST00000175539 82 ntBASIC20.45■□□□□ 0.86
Rtp1Q8C8C1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.45■□□□□ 0.86
Rtp1Q8C8C1 Gm29518-201ENSMUST00000190858 372 ntBASIC20.45■□□□□ 0.86
Rtp1Q8C8C1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtp1Q8C8C1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtp1Q8C8C1 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.45■□□□□ 0.86
Rtp1Q8C8C1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Gm21559-201ENSMUST00000220638 855 ntBASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Gm8587-201ENSMUST00000076538 843 ntBASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtp1Q8C8C1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtp1Q8C8C1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Rtp1Q8C8C1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.42■□□□□ 0.86
Rtp1Q8C8C1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtp1Q8C8C1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rtp1Q8C8C1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rtp1Q8C8C1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtp1Q8C8C1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtp1Q8C8C1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtp1Q8C8C1 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.42■□□□□ 0.86
Rtp1Q8C8C1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtp1Q8C8C1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.41■□□□□ 0.86
Rtp1Q8C8C1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 Gm27389-201ENSMUST00000183622 195 ntBASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 Gm17808-201ENSMUST00000200859 894 ntBASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rtp1Q8C8C1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rtp1Q8C8C1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rtp1Q8C8C1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms