Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Lin9Q8C735 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Lin9Q8C735 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lin9Q8C735 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Lin9Q8C735 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Lin9Q8C735 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.55■□□□□ 0.72
Lin9Q8C735 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lin9Q8C735 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.55■□□□□ 0.72
Lin9Q8C735 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lin9Q8C735 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Lin9Q8C735 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lin9Q8C735 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Lin9Q8C735 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lin9Q8C735 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lin9Q8C735 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Lin9Q8C735 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lin9Q8C735 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lin9Q8C735 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lin9Q8C735 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lin9Q8C735 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Lin9Q8C735 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin9Q8C735 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin9Q8C735 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.53■□□□□ 0.72
Lin9Q8C735 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin9Q8C735 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin9Q8C735 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Lin9Q8C735 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin9Q8C735 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin9Q8C735 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin9Q8C735 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin9Q8C735 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.52■□□□□ 0.72
Lin9Q8C735 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Lin9Q8C735 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Lin9Q8C735 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.52■□□□□ 0.72
Lin9Q8C735 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.52■□□□□ 0.72
Lin9Q8C735 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin9Q8C735 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Lin9Q8C735 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lin9Q8C735 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lin9Q8C735 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lin9Q8C735 Mir7071-201ENSMUST00000184847 69 ntBASIC19.51■□□□□ 0.71
Lin9Q8C735 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lin9Q8C735 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lin9Q8C735 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lin9Q8C735 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Lin9Q8C735 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
Lin9Q8C735 Fst-202ENSMUST00000223640 2612 ntBASIC19.5■□□□□ 0.71
Lin9Q8C735 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Lin9Q8C735 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.5■□□□□ 0.71
Lin9Q8C735 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.5■□□□□ 0.71
Lin9Q8C735 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.5■□□□□ 0.71
Lin9Q8C735 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.5■□□□□ 0.71
Lin9Q8C735 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Lin9Q8C735 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin9Q8C735 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin9Q8C735 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin9Q8C735 Tgds-204ENSMUST00000228543 1594 ntBASIC19.49■□□□□ 0.71
Lin9Q8C735 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lin9Q8C735 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin9Q8C735 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin9Q8C735 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin9Q8C735 Gm44549-201ENSMUST00000208351 577 ntBASIC19.49■□□□□ 0.71
Lin9Q8C735 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin9Q8C735 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin9Q8C735 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin9Q8C735 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Lin9Q8C735 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Lin9Q8C735 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lin9Q8C735 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Lin9Q8C735 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lin9Q8C735 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lin9Q8C735 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms