Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp20Q8C6M1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Usp20Q8C6M1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp20Q8C6M1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp20Q8C6M1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Gm10231-201ENSMUST00000181584 441 ntBASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Gm10175-202ENSMUST00000208752 441 ntBASIC19.76■□□□□ 0.75
Usp20Q8C6M1 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp20Q8C6M1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp20Q8C6M1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp20Q8C6M1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp20Q8C6M1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp20Q8C6M1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp20Q8C6M1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Mir6349-201ENSMUST00000184059 97 ntBASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
Usp20Q8C6M1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Gm11539-201ENSMUST00000119837 557 ntBASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Gm13436-201ENSMUST00000120418 567 ntBASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp20Q8C6M1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Usp20Q8C6M1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp20Q8C6M1 BC021767-201ENSMUST00000126387 1716 ntBASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.71■□□□□ 0.75
Usp20Q8C6M1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms