Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp44Q8C2S0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp44Q8C2S0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp44Q8C2S0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.99■□□□□ 0.95
Usp44Q8C2S0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Usp44Q8C2S0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp44Q8C2S0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp44Q8C2S0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp44Q8C2S0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp44Q8C2S0 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.99■□□□□ 0.95
Usp44Q8C2S0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Usp44Q8C2S0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Usp44Q8C2S0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp44Q8C2S0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp44Q8C2S0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.98■□□□□ 0.95
Usp44Q8C2S0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp44Q8C2S0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp44Q8C2S0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.97■□□□□ 0.95
Usp44Q8C2S0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp44Q8C2S0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp44Q8C2S0 Gm20760-201ENSMUST00000179197 648 ntBASIC20.96■□□□□ 0.95
Usp44Q8C2S0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Usp44Q8C2S0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.96■□□□□ 0.95
Usp44Q8C2S0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.96■□□□□ 0.95
Usp44Q8C2S0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Usp44Q8C2S0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp44Q8C2S0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp44Q8C2S0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Usp44Q8C2S0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp44Q8C2S0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp44Q8C2S0 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.95■□□□□ 0.95
Usp44Q8C2S0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp44Q8C2S0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
Usp44Q8C2S0 Gm18666-201ENSMUST00000190039 958 ntBASIC20.95■□□□□ 0.94
Usp44Q8C2S0 Gm29791-202ENSMUST00000207888 369 ntBASIC20.95■□□□□ 0.94
Usp44Q8C2S0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp44Q8C2S0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp44Q8C2S0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp44Q8C2S0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp44Q8C2S0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp44Q8C2S0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
Usp44Q8C2S0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp44Q8C2S0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp44Q8C2S0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Gm18025-201ENSMUST00000221733 862 ntBASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp44Q8C2S0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Gm13401-201ENSMUST00000117074 291 ntBASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Gm11643-201ENSMUST00000119578 864 ntBASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Gm27011-201ENSMUST00000182352 972 ntBASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms