Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Gm4968-201ENSMUST00000071458 858 ntBASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.6■□□□□ 0.57
Sh3rf3Q8C120 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sh3rf3Q8C120 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3rf3Q8C120 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3rf3Q8C120 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3rf3Q8C120 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3rf3Q8C120 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3rf3Q8C120 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf3Q8C120 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf3Q8C120 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf3Q8C120 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf3Q8C120 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf3Q8C120 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf3Q8C120 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Sh3rf3Q8C120 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.55■□□□□ 0.56
Sh3rf3Q8C120 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf3Q8C120 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.55■□□□□ 0.56
Sh3rf3Q8C120 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf3Q8C120 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sh3rf3Q8C120 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sh3rf3Q8C120 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.55■□□□□ 0.56
Sh3rf3Q8C120 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Sh3rf3Q8C120 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms