Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Gm715-201ENSMUST00000117865 831 ntBASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim47Q8C0E3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim47Q8C0E3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim47Q8C0E3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim47Q8C0E3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Trim47Q8C0E3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.77■□□□□ 0.76
Trim47Q8C0E3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim47Q8C0E3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim47Q8C0E3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim47Q8C0E3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.77■□□□□ 0.76
Trim47Q8C0E3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim47Q8C0E3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Grk6-206ENSMUST00000224995 2971 ntBASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim47Q8C0E3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.75■□□□□ 0.75
Trim47Q8C0E3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim47Q8C0E3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim47Q8C0E3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim47Q8C0E3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim47Q8C0E3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim47Q8C0E3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim47Q8C0E3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.74■□□□□ 0.75
Trim47Q8C0E3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim47Q8C0E3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim47Q8C0E3 Gm12382-201ENSMUST00000122005 922 ntBASIC19.74■□□□□ 0.75
Trim47Q8C0E3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim47Q8C0E3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim47Q8C0E3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms