Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trerf1Q8BXJ2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Gm4968-201ENSMUST00000071458 858 ntBASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Trerf1Q8BXJ2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trerf1Q8BXJ2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.77■□□□□ 0.59
Trerf1Q8BXJ2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Fst-202ENSMUST00000223640 2612 ntBASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trerf1Q8BXJ2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Gm12441-201ENSMUST00000121806 588 ntBASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trerf1Q8BXJ2 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Gm5408-201ENSMUST00000197998 747 ntBASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms