Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.47■□□□□ 0.07
Trank1Q8BV79 Mzt1-203ENSMUST00000227948 952 ntBASIC15.47■□□□□ 0.07
Trank1Q8BV79 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.47■□□□□ 0.07
Trank1Q8BV79 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trank1Q8BV79 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trank1Q8BV79 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trank1Q8BV79 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trank1Q8BV79 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trank1Q8BV79 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trank1Q8BV79 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.45■□□□□ 0.06
Trank1Q8BV79 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.44■□□□□ 0.06
Trank1Q8BV79 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.44■□□□□ 0.06
Trank1Q8BV79 Gm10566-201ENSMUST00000086739 996 ntBASIC15.44■□□□□ 0.06
Trank1Q8BV79 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.44■□□□□ 0.06
Trank1Q8BV79 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.44■□□□□ 0.06
Trank1Q8BV79 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Gm6623-201ENSMUST00000173570 544 ntBASIC15.44■□□□□ 0.06
Trank1Q8BV79 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trank1Q8BV79 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Gm11950-201ENSMUST00000121615 838 ntBASIC15.43■□□□□ 0.06
Trank1Q8BV79 Gm27459-201ENSMUST00000184860 107 ntBASIC15.43■□□□□ 0.06
Trank1Q8BV79 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.43■□□□□ 0.06
Trank1Q8BV79 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.43■□□□□ 0.06
Trank1Q8BV79 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trank1Q8BV79 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.42■□□□□ 0.06
Trank1Q8BV79 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Notumos-201ENSMUST00000151998 2659 ntBASIC15.42■□□□□ 0.06
Trank1Q8BV79 Gm18958-201ENSMUST00000174258 762 ntBASIC15.42■□□□□ 0.06
Trank1Q8BV79 Gm17808-201ENSMUST00000200859 894 ntBASIC15.42■□□□□ 0.06
Trank1Q8BV79 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trank1Q8BV79 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.42■□□□□ 0.06
Trank1Q8BV79 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.42■□□□□ 0.06
Trank1Q8BV79 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trank1Q8BV79 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trank1Q8BV79 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trank1Q8BV79 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms