Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nhlrc1Q8BR37 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nhlrc1Q8BR37 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc1Q8BR37 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nhlrc1Q8BR37 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc1Q8BR37 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc1Q8BR37 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nhlrc1Q8BR37 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nhlrc1Q8BR37 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc1Q8BR37 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nhlrc1Q8BR37 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nhlrc1Q8BR37 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nhlrc1Q8BR37 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.83□□□□□ -0.19
Nhlrc1Q8BR37 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Nhlrc1Q8BR37 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nhlrc1Q8BR37 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Gm15375-201ENSMUST00000119510 849 ntBASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Mir6349-201ENSMUST00000184059 97 ntBASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nhlrc1Q8BR37 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nhlrc1Q8BR37 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nhlrc1Q8BR37 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nhlrc1Q8BR37 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms