Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco3Q8BQM7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Gm5812-201ENSMUST00000061073 957 ntBASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smco3Q8BQM7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Gm7860-201ENSMUST00000121190 879 ntBASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Smco3Q8BQM7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smco3Q8BQM7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Golgb1-201ENSMUST00000023534 498 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms