Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdhr3Q8BL00 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Gm6420-201ENSMUST00000193885 723 ntBASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.62■□□□□ 0.09
Cdhr3Q8BL00 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Nespas-201ENSMUST00000143738 1083 ntBASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdhr3Q8BL00 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cdhr3Q8BL00 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Gm42778-201ENSMUST00000199644 553 ntBASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdhr3Q8BL00 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdhr3Q8BL00 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdhr3Q8BL00 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdhr3Q8BL00 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cdhr3Q8BL00 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Idnk-204ENSMUST00000226010 1898 ntBASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms