Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2bQ8BJF9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2bQ8BJF9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2bQ8BJF9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.29■□□□□ 0.52
Chmp2bQ8BJF9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.29■□□□□ 0.52
Chmp2bQ8BJF9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2bQ8BJF9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2bQ8BJF9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2bQ8BJF9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Chmp2bQ8BJF9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2bQ8BJF9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2bQ8BJF9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2bQ8BJF9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2bQ8BJF9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Chmp2bQ8BJF9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2bQ8BJF9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2bQ8BJF9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2bQ8BJF9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2bQ8BJF9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2bQ8BJF9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2bQ8BJF9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2bQ8BJF9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp2bQ8BJF9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp2bQ8BJF9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2bQ8BJF9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.25■□□□□ 0.51
Chmp2bQ8BJF9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Gm10493-201ENSMUST00000097270 612 ntBASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2bQ8BJF9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms