Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn3Q8BHH8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Rab3c-203ENSMUST00000224180 967 ntBASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn3Q8BHH8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn3Q8BHH8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clrn3Q8BHH8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Clrn3Q8BHH8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clrn3Q8BHH8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clrn3Q8BHH8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clrn3Q8BHH8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.71■□□□□ 0.27
Clrn3Q8BHH8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clrn3Q8BHH8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clrn3Q8BHH8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Clrn3Q8BHH8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clrn3Q8BHH8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clrn3Q8BHH8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clrn3Q8BHH8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Clrn3Q8BHH8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Gm5408-201ENSMUST00000197998 747 ntBASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Gm44549-201ENSMUST00000208351 577 ntBASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Clrn3Q8BHH8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms