Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Gm2399-201ENSMUST00000104944 225 ntBASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc116Q80X53 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Mir5133-201ENSMUST00000174955 77 ntBASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Gm38285-201ENSMUST00000192928 922 ntBASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc116Q80X53 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc116Q80X53 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc116Q80X53 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Rab3c-203ENSMUST00000224180 967 ntBASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc116Q80X53 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Zfp783-201ENSMUST00000095946 670 ntBASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms