Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Gm3375-201ENSMUST00000203929 796 ntBASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Odf3b-204ENSMUST00000227834 930 ntBASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.47■□□□□ 0.71
Sh3tc2Q80VA5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Timm23-208ENSMUST00000226683 750 ntBASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3tc2Q80VA5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Sh3tc2Q80VA5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3tc2Q80VA5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3tc2Q80VA5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Gm12382-201ENSMUST00000122005 922 ntBASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.43■□□□□ 0.7
Sh3tc2Q80VA5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sh3tc2Q80VA5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3tc2Q80VA5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms