Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp38Q80UU2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp38Q80UU2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp38Q80UU2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp38Q80UU2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.86■□□□□ 0.45
Rpp38Q80UU2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.86■□□□□ 0.45
Rpp38Q80UU2 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.86■□□□□ 0.45
Rpp38Q80UU2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp38Q80UU2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp38Q80UU2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.86■□□□□ 0.45
Rpp38Q80UU2 Rarb-207ENSMUST00000225921 2756 ntBASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.85■□□□□ 0.45
Rpp38Q80UU2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp38Q80UU2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.83■□□□□ 0.45
Rpp38Q80UU2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpp38Q80UU2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.83■□□□□ 0.45
Rpp38Q80UU2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp38Q80UU2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp38Q80UU2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
Rpp38Q80UU2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rpp38Q80UU2 Gm11643-201ENSMUST00000119578 864 ntBASIC17.83■□□□□ 0.44
Rpp38Q80UU2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp38Q80UU2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.83■□□□□ 0.44
Rpp38Q80UU2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp38Q80UU2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp38Q80UU2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rpp38Q80UU2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp38Q80UU2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp38Q80UU2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Trmt13-210ENSMUST00000198454 880 ntBASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp38Q80UU2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp38Q80UU2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms